Stem-loop oan-mir-1335

Accession

MI0006681

Description

Ornithorhynchus anatinus oan-mir-1335 precursor miRNA

Sequence

gagggacugaacgccgccagugucacucccagcucggucugguauguccugucucggaugcuggguguccuuaucugucaggggguGGCUGAGGUGGGCUCCCUc
((((((.(((.(((.....))))))..((((.(((((((....((.(((((...((((((..((....)).)))))).))))).))))))))).)))).))))))

Structure

      cugaacgccgccagugucacu    g       uggu  g     ucu      cu  g 
gaggga                     ccca cucgguc    au uccug   cggaug  gg u
||||||                     |||| |||||||    || |||||   ||||||  ||  
cUCCCU                     GGGU GAGUCGG    ug gggac   gucuau  cc g
      --------------------C    G       ----  g     --u      -u  u 

Annotation confidence Not enough data

Genome context

3: 56470846-56470950 [-]

Mature oan-miR-1335

• Accession: MIMAT0006828
• Description: Ornithorhynchus anatinus oan-miR-1335 mature miRNA
• Sequence: 87 - GGCUGAGGUGGGCUCCCU - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004