Stem-loop bna-MIR169h

Accession

MI0006464

Description

Brassica napus bna-MIR169h precursor miRNA

Literature search

11 open access papers mention bna-MIR169h
(43 sentences)

Sequence

gagaaauggugacaugaagaaugagaaguuguguggUAGCCAAGGAUGACUUGCCUGCgucuuagaccauaucuaucaaagacuaaaagauugauagucuucgaugaauugguuaaucgguaggcagucuccucggcuauucagacaguucucuuucuccucauuucacauuucuc
((((((((.(((.((((((((.(((((.((((.((((((((.((((.((((.((((((......(((((..((.(((.(((((((.........))))))).)))))..))))).....)))))))))))))).))))).))).))))))))).))))..)))).)))))))))))

Structure

        g   c    --    u     g    g   -     A    U    U      gucuua     ua  u   a       aaa 
gagaaaug uga auga  agaa gagaa uugu ugg UAGCC AGGA GACU GCCUGC      gacca  uc auc aagacua   g
|||||||| ||| ||||  |||| ||||| |||| ||| ||||| |||| |||| ||||||      |||||  || ||| |||||||   a
cucuuuac acu uacu  ucuu cucuu gaca acu aucgg uccu cuga cggaug      uuggu  ag uag uucugau   u
        -   u    cc    u     -    g   u     c    -    -      -gcuaa     ua  -   c       agu 

Annotation confidence Not enough data

Genome context

EM:BZ062541: 101-276 [+]

Mature bna-miR169h

• Accession: MIMAT0005619
• Description: Brassica napus bna-miR169h mature miRNA
• Sequence: 37 - UAGCCAAGGAUGACUUGCCUGC - 58
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856