Accession
MI0006215
Description
Chlamydomonas reinhardtii
cre-MIR1153 precursor miRNA
Sequence
caaaUGGGCCAUCGUAUUACUAUCAGUGCUGCUAGCAACUACAAGgcgggcaugaaggucgauuugauccgaucgaccuucaugaccgccUUGUAAUUGCCGGUAGCACUGAUUGUAAUGCGAUGGCUCauuug
((((((((((((((((((((.((((((((((((.((((.((((((((((.((((((((((((((......)))))))))))))).)))))))))).)))).)))))))))))).))))))))))))))))))))
((((((((((((((((((((.((((((((((((.((((.((((((((((.((((((((((((((......)))))))))))))).)))))))))).)))).)))))))))))).))))))))))))))))))))
Structure
U A C g ug
caaaUGGGCCAUCGUAUUAC AUCAGUGCUGCU GCAA UACAAGgcgg caugaaggucgauu a
|||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||
guuuaCUCGGUAGCGUAAUG UAGUCACGAUGG CGUU AUGUUccgcc guacuuccagcuag u
U C A a cc
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Molner et al. identify two miR/miR* pairs from the same hairpin precursor [1].
Genome context
scaffold_15: 1291877-1292010 [+]
Database links
Mature cre-miR1153-5p.1
| Accession | MIMAT0005398 |
| Description | Chlamydomonas reinhardtii cre-miR1153-5p.1 mature miRNA |
| Sequence | 5 - UGGGCCAUCGUAUUACUAUCAG - 26 |
| Evidence |
experimental
cloned [1] |
Mature cre-miR1153-5p.2
| Accession | MIMAT0005399 |
| Description | Chlamydomonas reinhardtii cre-miR1153-5p.2 mature miRNA |
| Sequence | 25 - AGUGCUGCUAGCAACUACAAG - 45 |
| Evidence |
experimental
cloned [1] |
Mature cre-miR1153-3p.2
| Accession | MIMAT0005400 |
| Description | Chlamydomonas reinhardtii cre-miR1153-3p.2 mature miRNA |
| Sequence | 91 - UUGUAAUUGCCGGUAGCACUGA - 112 |
| Evidence |
experimental
cloned [1] |
Mature cre-miR1153-3p.1
| Accession | MIMAT0005401 |
| Description | Chlamydomonas reinhardtii cre-miR1153-3p.1 mature miRNA |
| Sequence | 111 - GAUUGUAAUGCGAUGGCUC - 129 |
| Evidence |
experimental
cloned [1] |
References
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