miRBase entry: smo-MIR1095a

Stem-loop smo-MIR1095a


Accession
MI0006081
Description
Selaginella moellendorffii smo-MIR1095a precursor miRNA
Gene family
MIPF0000473; MIR1095


Sequence

ugucuuguguuugggaauaaaggaaccuaggagggccggguuugcgaacuuccuggguggugauaugcuccgcugagcucgagcaguguaauuaucacuugcuugcaccgccggaagaaaugugauccUAGGUUCCCUUGUUUCCAAAUucaaggccggug
.((((((.((((((((((((.(((((((((((..((((......))..(((((..(((((((....((((....)))).(((((((((.......))).))))))))))))))))))....))..))))))))))).)))))))))))).)))))).....

Structure
----u      u            a           gg  cggguuugcgaa     ug       auaugcuccgcugagcu      -   ua 
     gucuug guuugggaauaa ggaaccuagga  gc            cuucc  gguggug                 cgagca gug  a
     |||||| |||||||||||| |||||||||||  ||            |||||  |||||||                 |||||| |||  u
     cggaac UAAACCUUUGUU CCUUGGAUccu  ug            gaagg  ccgccac                 guucgu cac  u
guggc      u            C           ag  --------uaaa     --       -----------------      u   ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1095a

Accession MIMAT0005250
Description Selaginella moellendorffii smo-miR1095a mature miRNA
Sequence 129 - UAGGUUCCCUUGUUUCCAAAU - 149
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769