Stem-loop ppt-MIR1075

Accession

MI0006041

Description

Physcomitrella patens ppt-MIR1075 precursor miRNA

Sequence

gguugguugagugaacuugacaucuauauugguaggaaccaugccuggaacaaggcaaaacaacuacccaaaguggguauucucuuugccuUGUUUCAGUCAUGGUUUCUACuggugcuugucguugaucacugucuuuauc
.........(((((.(.(((((....(((((((((((((((((.(((((((((((((((.....((((((...)))))).....))))))))))))))).)))))))))))))))))..)))))..).))))).........

Structure

gguugguug     a -u     ucua                 c               acaac      a 
         aguga c  ugaca    uauugguaggaaccaug cuggaacaaggcaaa     uaccca  
         ||||| |  |||||    ||||||||||||||||| |||||||||||||||     |||||| a
         ucacu g  gcugu    gugguCAUCUUUGGUAC GACUUUGUuccguuu     augggu  
cuauuucug     a uu     --uc                 U               cucuu      g 

Annotation confidence Not enough data

Genome context

Chr13: 8730372-8730513 [-]

Mature ppt-miR1075

• Accession: MIMAT0005205
• Description: Physcomitrella patens ppt-miR1075 mature miRNA
• Sequence: 92 - UGUUUCAGUCAUGGUUUCUAC - 112
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769