Stem-loop mdv2-mir-M25

Accession

MI0005893

Description

Mareks disease virus type 2 mdv2-mir-M25 precursor miRNA

Sequence

cguguCCUCCUUCGGACGAGUGCUUGCCggggaguaaccgucaUGCACUACUCCGGGGGUAGGACgcg
((((((((((((((((..(((((.((.(((.......))).)).)))))..)))))))).))))))))

Structure

        -        CG     U  C   gg 
cguguCCU CCUUCGGA  AGUGC UG Cgg  a
|||||||| ||||||||  ||||| || |||  g
gcgCAGGA GGGGGCCU  UCACG ac gcc  u
        U        CA     U  u   aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdv2-miR-M25-5p

• Accession: MIMAT0004469
• Description: Mareks disease virus type 2 mdv2-miR-M25-5p mature miRNA
• Sequence: 6 - CCUCCUUCGGACGAGUGCUUGCC - 28
• Evidence: experimental ; cloned [1], Illumina [2]

Mature mdv2-miR-M25-3p

• Accession: MIMAT0004470
• Description: Mareks disease virus type 2 mdv2-miR-M25-3p mature miRNA
• Sequence: 44 - UGCACUACUCCGGGGGUAGGAC - 65
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 17459919
   Marek's disease virus type 2 (MDV-2)-encoded microRNAs show no sequence conservation with those encoded by MDV-1
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Sewer A, Zavolan M, Nair V"
   "J Virol (2007) 81:7164-7170


2. PubMed ID: 19328516
   MicroRNAs of Gallid and Meleagrid herpesviruses show generally conserved genomic locations and are virus-specific
   "Waidner LA, Morgan RW, Anderson AS, Bernberg EL, Kamboj S, Garcia M, Riblet SM, Ouyang M, Isaacs GK, Markis M, Meyers BC, Green PJ, Burnside J"
   "Virology (2009) 388:128-136