Stem-loop dme-mir-983-1

Accession

MI0005840

Description

Drosophila melanogaster dme-mir-983-1 precursor miRNA

Gene family

MIPF0000450; mir-983

Literature search

4 open access papers mention dme-mir-983-1
(16 sentences)

Sequence

1676 reads, 327 reads per million, 48 experiments

uauauugcaauaauuaaAUAAUACGUUUCGAACUAAUGAuuuucaguucauucAUUAGGUAGUUACGCAUUAUCUaguuguuguaaacauu
....((((((((((((.(((((.(((..(...(((((((............)))))))...)..))).))))).)))))))))))).....

Structure

-uaua            a     A   UU GAA       uuuuc 
     uugcaauaauua AUAAU CGU  C   CUAAUGA     a
     |||||||||||| ||||| |||  |   |||||||      
     aauguuguugaU UAUUA GCA  G   GAUUAcu     g
uuaca            C     C   UU AUG       uacuu 

Annotation confidence High

Genome context

chrX: 4368309-4368399 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from dme-mir-983-1

Mature dme-miR-983-5p

• Accession: MIMAT0005499
• Description: Drosophila melanogaster dme-miR-983-5p mature miRNA
• Sequence: 18 - AUAAUACGUUUCGAACUAAUGA - 39
• Evidence: experimental ; 454 [1]

Mature dme-miR-983-3p

• Accession: MIMAT0020880
• Description: Drosophila melanogaster dme-miR-983-3p mature miRNA
• Sequence: 54 - AUUAGGUAGUUACGCAUUAUCU - 75
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864