Accession
MI0005835
Description
Drosophila melanogaster
dme-mir-978 precursor miRNA
Gene family
MIPF0000926;
mir-978
Literature search
1 open access papers mention dme-mir-978
(1 sentences)
(1 sentences)
Sequence
1005
reads,
486
reads per million, 34 experiments
guuggcggcacaaucUGCAAUCUACGCCACUGGCUUACGuugcaaucgaaaaucgUGUCCAGUGCCGUAAAUUGCAGuugugugaacgcaaa
....(((((((((.(((((((.((((.((((((..((((..............)))).)))))).)))).)))))))))))))...)))...
....(((((((((.(((((((.((((.((((((..((((..............)))).)))))).)))).)))))))))))))...)))...
Structure
guug --- u C C CU uugcaa
gcg gcacaa cUGCAAU UACG CACUGG UACG u
||| |||||| ||||||| |||| |||||| ||||
cgc uguguu GACGUUA AUGC GUGACC GUgc c
-aaa aag - A C -U uaaaag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrX: 19561236-19561327 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from dme-mir-978
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-978-3p
| Accession | MIMAT0005494 |
| Description | Drosophila melanogaster dme-miR-978-3p mature miRNA |
| Sequence | 56 - UGUCCAGUGCCGUAAAUUGCAG - 77 |
| Evidence |
experimental
454 [1] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-978-5p
| Accession | MIMAT0020875 |
| Description | Drosophila melanogaster dme-miR-978-5p mature miRNA |
| Sequence | 16 - UGCAAUCUACGCCACUGGCUUACG - 39 |
| Evidence | not_experimental |
| Database links |
|
References
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