Accession
MI0005816
Description
Drosophila melanogaster
dme-mir-961 precursor miRNA
Gene family
MIPF0001006;
mir-961
Literature search
1 open access papers mention dme-mir-961
(1 sentences)
(1 sentences)
Sequence
341
reads,
110
reads per million, 37 experiments
ucaagggccgaguuaccUUUGAUCACCAGUAACUGAGAUuguuucugauacgguUUCGUUUUCUGGCAAUCAAAAGaacuuggacucga
....((((((((((.(.((((((..((((.(((.((((((((.......)))))))))))..))))..)))))).)))))))).)))..
....((((((((((.(.((((((..((((.(((.((((((((.......)))))))))))..))))..)))))).)))))))).)))..
Structure
ucaa - a c CA -U U uu
ggg ccgaguu c UUUGAU CCAG AAC GAGAUugu c
||| ||||||| | |||||| |||| ||| |||||||| u
cuc gguucaa G AAACUA GGUC UUG CUUuggca g
--ag a - A AC UU - ua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr2L: 5641191-5641279 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dme-mir-961
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-961-5p
| Accession | MIMAT0005475 |
| Description | Drosophila melanogaster dme-miR-961-5p mature miRNA |
| Sequence | 18 - UUUGAUCACCAGUAACUGAGAU - 39 |
| Evidence |
experimental
454 [1] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-961-3p
| Accession | MIMAT0020856 |
| Description | Drosophila melanogaster dme-miR-961-3p mature miRNA |
| Sequence | 55 - UUCGUUUUCUGGCAAUCAAAAG - 76 |
| Evidence | not_experimental |
| Database links |
|
References
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