Accession
MI0005810
Description
Drosophila melanogaster
dme-mir-956 precursor miRNA
Gene family
MIPF0001983;
mir-956
Literature search
4 open access papers mention dme-mir-956
(31 sentences)
(31 sentences)
Sequence
4966512
reads,
32747
reads per million, 45 experiments
gaucguuaucGUGUUUGGAAUGGUCUCGUUAGCUaacggaugagcaagugcucggcucacuggcccaaaugcaguuugcccggagacgccgguuaacccagcacugaaauguguagUUUCGAGACCACUCUAAUCCAUUgcagcauuu
....(((...(((.(((((.((((((((..(((((.((.((.....((((((.((...((((((((....(((...)))..))....))))))...)).))))))...)).))))))).)))))))).)))))..)))...)))....
....(((...(((.(((((.((((((((..(((((.((.((.....((((((.((...((((((((....(((...)))..))....))))))...)).))))))...)).))))))).)))))))).)))))..)))...)))....
Structure
gauc auc -U A UU a g gagca c cuc ---- aaau g
guu GUG UUGGA UGGUCUCG AGCUa cg au agugcu gg acuggc cc gca
||| ||| ||||| |||||||| ||||| || || |||||| || |||||| || ||| u
cga UAC AAUCU ACCAGAGC UUgau gu ua ucacga cc uggccg gg cgu
uuua cgU CU C -U - g --aag c aau caga --cc u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr3L: 11773731-11773878 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-956
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dme-miR-956-3p
| Accession | MIMAT0005469 |
| Description | Drosophila melanogaster dme-miR-956-3p mature miRNA |
| Sequence | 117 - UUUCGAGACCACUCUAAUCCAUU - 139 |
| Evidence |
experimental
454 [1] |
| Database links |
|
| Predicted targets |
|
Mature dme-miR-956-5p
| Accession | MIMAT0020850 |
| Description | Drosophila melanogaster dme-miR-956-5p mature miRNA |
| Sequence | 11 - GUGUUUGGAAUGGUCUCGUUAGCU - 34 |
| Evidence | not_experimental |
| Database links |
|
References
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