Stem-loop bna-MIR399a

Accession

MI0005774

Description

Brassica napus bna-MIR399a precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

5 open access papers mention bna-MIR399a
(16 sentences)

Sequence

acagggcaagaucucuauuggcagaaaaccauuacuuagaucuuugcaucucuuucugcauugauuuguagugaguucucUGCCAAAGGAGAUUUGCCCGGu
...(((((.(((((((.((((((((.(((((((((..(((((..((((........))))..))))))))))).))).)))))))).))))))))))))...

Structure

aca     a       a        a   -      uu     uu    ucu 
   gggca gaucucu uuggcaga aac cauuac  agauc  ugca   c
   ||||| ||||||| |||||||| ||| ||||||  |||||  ||||    
   CCCGU UUAGAGG AACCGUcu uug gugaug  uuuag  acgu   u
uGG     -       A        c   a      --     uu    cuu 

Annotation confidence Not enough data

Genome context

EM:CX190537: 26-127 [+]

Mature bna-miR399a

• Accession: MIMAT0004449
• Description: Brassica napus bna-miR399a mature miRNA
• Sequence: 81 - UGCCAAAGGAGAUUUGCCCGG - 101
• Evidence: experimental ; RTPCR [1]

References

1. PubMed ID: 17367786
   Computational identification of novel microRNAs and targets in Brassica napus
   "Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM"
   "FEBS Lett (2007) 581:1464-1474