Stem-loop bna-MIR171g

Accession

MI0005771

Description

Brassica napus bna-MIR171g precursor miRNA

Literature search

5 open access papers mention bna-MIR171g
(14 sentences)

Sequence

gauauuggccugguucacucagauuacacacguacuauaugcauucucuuaguuaucUGAUUGAGCCGCGCCAAUAUCUc
(((((((((.(((((((.((((((.((........................)).)))))).))))))).)))))))))..

Structure

--         c       c      u  acacguacuau 
  gauauuggc ugguuca ucagau ac           a
  ||||||||| ||||||| |||||| ||            
  CUAUAACCG GCCGAGU AGUcua ug           u
cU         C       U      u  auucucuuacg 

Annotation confidence Not enough data

Genome context

Unknown

Mature bna-miR171g

• Accession: MIMAT0004446
• Description: Brassica napus bna-miR171g mature miRNA
• Sequence: 58 - UGAUUGAGCCGCGCCAAUAUCU - 79
• Evidence: experimental ; RTPCR [1], cloned [2]

References

1. PubMed ID: 17367786
   Computational identification of novel microRNAs and targets in Brassica napus
   "Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM"
   "FEBS Lett (2007) 581:1464-1474


2. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856