Stem-loop rrv-miR-rR1-7

Accession

MI0005724

Description

Rhesus monkey rhadinovirus rrv-miR-rR1-7 precursor miRNA

Sequence

ugcgauucgUGGAGAGCAGUUAACGUGCGUUCccgucaauuaauaccggCGCACGUCGAUUGCUCUCUAGggauccca
...(((((.((((((((((((.(((((((...(((...........)))))))))).)))))))))))).)))))...

Structure

ugc     g            A       UUC   ucaa 
   gauuc UGGAGAGCAGUU ACGUGCG   ccg    u
   ||||| |||||||||||| |||||||   |||    u
   cuagg AUCUCUCGUUAG UGCACGC   ggc    a
acc     G            C       ---   caua 

Annotation confidence Not enough data

Genome context

AF210726.1: 111055-111132 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from rrv-miR-rR1-7

Mature rrv-miR-rR1-7-5p

• Accession: MIMAT0004415
• Description: Rhesus monkey rhadinovirus rrv-miR-rR1-7-5p mature miRNA
• Sequence: 10 - UGGAGAGCAGUUAACGUGCGUUC - 32
• Evidence: experimental ; cloned [1]

Mature rrv-miR-rR1-7-3p

• Accession: MIMAT0004416
• Description: Rhesus monkey rhadinovirus rrv-miR-rR1-7-3p mature miRNA
• Sequence: 50 - CGCACGUCGAUUGCUCUCUAG - 70
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17451774
   Cloning and analysis of microRNAs encoded by the primate gamma-herpesvirus rhesus monkey rhadinovirus
   "Schafer A, Cai X, Bilello JP, Desrosiers RC, Cullen BR"
   "Virology (2007) 364:21-27