Stem-loop rrv-miR-rR1-5

Accession

MI0005722

Description

Rhesus monkey rhadinovirus rrv-miR-rR1-5 precursor miRNA

Sequence

caucguaacgcccCCGGAACCCAAAGACACGUGCCCGuggucuuaagaucgggcguguucuuuggauuccgucucguuacgaug
((((((((((....(((((.(((((((.(((((((((..(((....))))))))))))))))))).)))))...))))))))))

Structure

          cccC     C       C         ug   u 
caucguaacg    CGGAA CCAAAGA ACGUGCCCG  guc u
||||||||||    ||||| ||||||| |||||||||  |||  
guagcauugc    gccuu gguuucu ugugcgggc  uag a
          -ucu     a       -         --   a 

Annotation confidence Not enough data

Genome context

AF210726.1: 111474-111557 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from rrv-miR-rR1-5

Mature rrv-miR-rR1-5

• Accession: MIMAT0004412
• Description: Rhesus monkey rhadinovirus rrv-miR-rR1-5 mature miRNA
• Sequence: 14 - CCGGAACCCAAAGACACGUGCCCG - 37
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17451774
   Cloning and analysis of microRNAs encoded by the primate gamma-herpesvirus rhesus monkey rhadinovirus
   "Schafer A, Cai X, Bilello JP, Desrosiers RC, Cullen BR"
   "Virology (2007) 364:21-27