Accession
MI0005720
Description
Rhesus monkey rhadinovirus
rrv-miR-rR1-3 precursor miRNA
Sequence
cagggCCCGAUGAGCAGUUAGUCCguguuuagucgcgcucccuguuguguuuaaauuuaacaggguuugcgacagacacugauucgcugcccaaagucgccguu
...(((.(..((.(((((.((((.((((((.((((((..((((((((..........))))))))..)))))))))))).)))).))))).))..)..)))...
...(((.(..((.(((((.((((.((((((.((((((..((((((((..........))))))))..)))))))))))).)))).))))).))..)..)))...
Structure
cag -C GA A U C a cu uguu ggC C UG GCAGU AGUC guguuu gucgcg cccuguug u ||| | || ||||| |||| |||||| |||||| |||||||| ccg g ac cgucg uuag cacaga cagcgu gggacaau a uug cu aa c c u - uu uuaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
The predicted stem-loop precursor for miR-rR1-3 does not meet the processing rules published by the same authors in [2], and therefore may be incorrect (Cullen BR, pers. comm.).
Genome context
AF210726.1: 112664-112767 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from rrv-miR-rR1-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature rrv-miR-rR1-3
| Accession | MIMAT0004409 |
| Description | Rhesus monkey rhadinovirus rrv-miR-rR1-3 mature miRNA |
| Sequence | 6 - CCCGAUGAGCAGUUAGUCC - 24 |
| Evidence |
experimental
cloned [1] |
References
|
