Stem-loop mtr-MIR171f

Accession

MI0005627

Description

Medicago truncatula mtr-MIR171f precursor miRNA

Literature search

8 open access papers mention mtr-MIR171f
(53 sentences)

Sequence

40217 reads, 225.0 reads per million, 111 experiments

gaugAGAUAUUGGUGCGGUUCAAUCagaaggcagugcuuuuauaauucaaaaagcucuguguuauuugaUUGAGCCGUGCCAAUAUCACGuguua
.(((.((((((((((((((((((((((((.((((.((((((........)))))).)))).)..))))))))))))))))))))))).)))....

Structure

---g   A                       -- g    u      aua 
    aug GAUAUUGGUGCGGUUCAAUCaga  a gcag gcuuuu   a
    ||| |||||||||||||||||||||||  | |||| ||||||    
    uGC CUAUAACCGUGCCGAGUUaguuu  u uguc cgaaaa   u
auug   A                       au g    u      acu 

Annotation confidence High

Genome context

chr4: 46694027-46694121 [-]

Mature mtr-miR171f-5p

• Accession: MIMAT0054790
• Description: Medicago truncatula mtr-miR171f-5p mature miRNA
• Sequence: 5 - AGAUAUUGGUGCGGUUCAAUC - 25
• Evidence: experimental ; unknown

Mature mtr-miR171f-3p

• Accession: MIMAT0011113
• Description: Medicago truncatula mtr-miR171f-3p mature miRNA
• Sequence: 70 - UUGAGCCGUGCCAAUAUCACG - 90
• Evidence: not_experimental

References

1. 
   "Bonnet E"
   (2007) None: