Stem-loop mtr-MIR398c

Accession

MI0005611

Description

Medicago truncatula mtr-MIR398c precursor miRNA

Literature search

4 open access papers mention mtr-MIR398c
(10 sentences)

Sequence

75325 reads, 728.0 reads per million, 111 experiments

uuccacaGGGCCGACCCGAGACCACAUGaaguuaucauaugugucuaagcuacacaucucgUGUGUUCUCAGGUCGCCCCUGcugaa
...(((((((.(((((.((((.(((((((.(.......((((((.......)))))))))))))).)))).))))).))))).))..

Structure

uuc  -     C     C    C       a uuaucau      cu 
   ca caGGG CGACC GAGA CACAUGa g       augugu  a
   || ||||| ||||| |||| ||||||| |       ||||||  a
   gu GUCCC GCUGG CUCU GUGUgcu c       uacaca  g
-aa  c     C     A    U       - -------      uc 

Annotation confidence High

Genome context

chr7: 3345232-3345318 [-]

Mature mtr-miR398c-5p

• Accession: MIMAT0054781
• Description: Medicago truncatula mtr-miR398c-5p mature miRNA
• Sequence: 8 - GGGCCGACCCGAGACCACAUG - 28
• Evidence: experimental ; unknown

Mature mtr-miR398c-3p

• Accession: MIMAT0011097
• Description: Medicago truncatula mtr-miR398c-3p mature miRNA
• Sequence: 62 - UGUGUUCUCAGGUCGCCCCUG - 82
• Evidence: not_experimental

References

1. 
   "Bonnet E"
   (2007) None: