Stem-loop mtr-MIR398b

Accession

MI0005602

Description

Medicago truncatula mtr-MIR398b precursor miRNA

Literature search

6 open access papers mention mtr-MIR398b
(13 sentences)

Sequence

76061 reads, 739.0 reads per million, 111 experiments

uucuacaGGGUCGACAUGAGACCACAUGaagcuaucauauuugucuauguuauccaacucaUGUGUUCUCAGGUCGCCCCUGcugaa
.((..(((((.((((.(((((.(((((((......((((......)))).........))))))).))))).)))).)))))..)).

Structure

u  ua     U    A     C       ---agcuau    uu 
 uc  caGGG CGAC UGAGA CACAUGa         caua  u
 ||  ||||| |||| ||||| |||||||         ||||   
 ag  GUCCC GCUG ACUCU GUGUacu         guau  g
a  uc     C    G     U       caaccuauu    cu 

Annotation confidence High

Genome context

chr5: 37723218-37723304 [+]

Mature mtr-miR398b-5p

• Accession: MIMAT0054774
• Description: Medicago truncatula mtr-miR398b-5p mature miRNA
• Sequence: 8 - GGGUCGACAUGAGACCACAUG - 28
• Evidence: experimental ; unknown

Mature mtr-miR398b-3p

• Accession: MIMAT0011088
• Description: Medicago truncatula mtr-miR398b-3p mature miRNA
• Sequence: 62 - UGUGUUCUCAGGUCGCCCCUG - 82
• Evidence: not_experimental

References

1. 
   "Bonnet E"
   (2007) None: