Stem-loop mtr-MIR399j

Accession

MI0005591

Description

Medicago truncatula mtr-MIR399j precursor miRNA

Literature search

9 open access papers mention mtr-MIR399j
(23 sentences)

Sequence

121 reads, 2.0 reads per million, 66 experiments

uuacugggcaaugacuucuuuggcaguaguugacuugaucauucagaugaugcaaacaaacucacCGCCAAAGAAGAUUUGCCCCGcaauu
.....((((((...((((((((((.((((((...((((((((....))))).)))...)))).)).))))))))))..)))))).......

Structure

--uuacu      uga          a  -    gac   -     u 
       gggcaa   cuucuuuggc gu aguu   uug aucau c
       ||||||   |||||||||| || ||||   ||| |||||  
       CCCGUU   GAAGAAACCG ca ucaa   aac uagua a
uuaacGC      -UA          C  c    aca   g     g 

Annotation confidence Not enough data

Genome context

chr8: 24001880-24001970 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from mtr-MIR399j

Mature mtr-miR399j-3p

• Accession: MIMAT0011077
• Description: Medicago truncatula mtr-miR399j-3p mature miRNA
• Sequence: 66 - CGCCAAAGAAGAUUUGCCCCG - 86
• Evidence: not_experimental

References

1. 
   "Bonnet E"
   (2007) None: