Stem-loop mtr-MIR169f

Accession

MI0005583

Description

Medicago truncatula mtr-MIR169f precursor miRNA

Literature search

12 open access papers mention mtr-MIR169f
(52 sentences)

Sequence

3916 reads, 92.0 reads per million, 97 experiments

uuuauAAGCCAAGGAUGACUUGCCUAgcuaaaaaccauuuacauuaauuggggacuuaauuuguauauguuaugucugaucgaugaugaguaugucccuuguuuaguuuauuagcAGGCAGGUAUCCUAGGCUUUUuga
.....(((((.((((((.(((((((.(((((((((.....(((......((((((.......((((.((((((.........)))))).)))))))))))))...)))).)))))))))))))))))).))))).....

Structure

uuuau     A      A       A     -    cauuu   uuaauu      uuaauuu    a      guc 
     AAGCC AGGAUG CUUGCCU gcuaa aaac     aca      ggggac       guau uguuau   u
     ||||| |||||| ||||||| ||||| ||||     |||      ||||||       |||| ||||||   g
     UUCGG UCCUAU GGACGGA cgauu uuug     ugu      ucccug       uaug guagua   a
aguUU     A      -       -     a    --auu   ------      -------    a      gcu 

Annotation confidence High

Genome context

chr3: 34270912-34271050 [+]

Mature mtr-miR169f-5p

• Accession: MIMAT0011069
• Description: Medicago truncatula mtr-miR169f-5p mature miRNA
• Sequence: 6 - AAGCCAAGGAUGACUUGCCUA - 26
• Evidence: not_experimental

Mature mtr-miR169f-3p

• Accession: MIMAT0054768
• Description: Medicago truncatula mtr-miR169f-3p mature miRNA
• Sequence: 116 - AGGCAGGUAUCCUAGGCUUUU - 136
• Evidence: experimental ; unknown

References

1. 
   "Bonnet E"
   (2007) None: