miRBase entry: mmu-mir-590

Stem-loop mmu-mir-590


Accession
MI0005519
Symbol
MGI: Mir590
Description
Mus musculus mmu-mir-590 precursor miRNA

Literature search
29 open access papers mention mmu-mir-590
(392 sentences)

Sequence

194 reads, 217 reads per million, 5 experiments
agucagaaauGAGCUUAUUCAUAAAAGUGCAGuauggugaagucaaucugUAAUUUUAUGUAUAAGCUAGUcucugauuga
(((((((.((.(((((((.(((((((.(((((..(((.....)))..))))).))))))).))))))).)).)))))))..

Structure
--       a  G       U       G     ua   u 
  agucaga au AGCUUAU CAUAAAA UGCAG  ugg g
  ||||||| || ||||||| ||||||| |||||  ||| a
  uuagucu UG UCGAAUA GUAUUUU AUguc  acu a
ag       c  A       U       A     ua   g 


Annotation confidence High
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Genome context
Unknown

Database links

Mature mmu-miR-590-5p

Accession MIMAT0004895
Description Mus musculus mmu-miR-590-5p mature miRNA
Sequence 11 - GAGCUUAUUCAUAAAAGUGCAG - 32
Evidence experimental
cloned [1]

Mature mmu-miR-590-3p

Accession MIMAT0004896
Description Mus musculus mmu-miR-590-3p mature miRNA
Sequence 51 - UAAUUUUAUGUAUAAGCUAGU - 71
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414