Stem-loop mmu-mir-504

Accession

MI0005515

Symbol

MGI: Mir504

Description

Mus musculus mmu-mir-504 precursor miRNA mir-504

Gene
family

RF00939; mir-504

Literature search

20 open access papers mention mmu-mir-504
(169 sentences)

Sequence

2211 reads, 6 reads per million, 67 experiments

uccuguugggAGACCCUGGUCUGCACUCUAUCuguaaacuuacugaAGGGAGAGCAGGGCAGGGUUUCccauacagagg
..((((((((((((((((.(((((.((((.((.(((....))).))..)))).))))).)))))))))))).))))...

Structure

-uc    -            G     A    -A  u   a 
   cugu ugggAGACCCUG UCUGC CUCU  UC gua a
   |||| |||||||||||| ||||| ||||  || |||  
   gaca accCUUUGGGAC GGACG GAGG  ag cau c
gga    u            G     A    GA  u   u 

Annotation confidence High

Genome context

chrX: 59097658-59097736 [-]

Mature mmu-miR-504-5p

• Accession: MIMAT0004889
• Description: Mus musculus mmu-miR-504-5p mature miRNA
• Sequence: 11 - AGACCCUGGUCUGCACUCUAUC - 32
• Evidence: experimental ; Illumina [2-3]

Mature mmu-miR-504-3p

• Accession: MIMAT0017277
• Description: Mus musculus mmu-miR-504-3p mature miRNA
• Sequence: 47 - AGGGAGAGCAGGGCAGGGUUUC - 68
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009