miRBase entry: mmu-mir-466b-1

Stem-loop mmu-mir-466b-1


Accession
MI0005502
Symbol
MGI: Mir466b-1
Description
Mus musculus mmu-mir-466b-1 precursor miRNA mir-466
Gene
family?
RF04052; mir-466

Literature search
28 open access papers mention mmu-mir-466b-1
(91 sentences)

Sequence

20232 reads, 368 reads per million, 100 experiments
uguauguguUGAUGUGUGUGUACAUGUACAUgugugaauaugauauacauAUACAUACACGCACACAUAAGAcacauaugag
.(((((((((.((((((((((..(((((.(((((((.......))))))).)))))..))))))))))..)))))))))...

Structure
--u         -G          AC     C       aa 
   guauguguU  AUGUGUGUGU  AUGUA AUgugug  u
   |||||||||  ||||||||||  ||||| |||||||  a
   uauacacAG  UACACACGCA  UACAU uacauau  u
gag         AA          CA     A       ag 


Annotation confidence Not enough data
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Genome context
chr2: 10474219-10474300 [+]
Clustered miRNAs
29 other miRNAs are < 10 kb from mmu-mir-466b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-466b-5p

Accession MIMAT0004875
Description Mus musculus mmu-miR-466b-5p mature miRNA
Sequence 10 - UGAUGUGUGUGUACAUGUACAU - 31
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-466b-3p

Accession MIMAT0004876
Description Mus musculus mmu-miR-466b-3p mature miRNA
Sequence 51 - AUACAUACACGCACACAUAAGA - 72
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  3. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009