Stem-loop bta-mir-195

Accession

MI0005459

Description

Bos taurus bta-mir-195 precursor miRNA

Literature search

134 open access papers mention bta-mir-195
(929 sentences)

Sequence

1408246 reads, 574.0 reads per million, 312 experiments

agcuccccuggcucUAGCAGCACAGAAAUAUUGGCAcugggaagaaagccugCCAAUAUUGGCUGUGCUGCUCCAggcaggguggug
.(((.(((((.((..((((((((((.((((((((((..((........))))))))))))..))))))))))..)).))))).))).

Structure

a   c     g  cU          -A          cu  gaa 
 gcu cccug cu  AGCAGCACAG  AAUAUUGGCA  gg   g
 ||| ||||| ||  ||||||||||  ||||||||||  ||    
 ugg gggac gA  UCGUCGUGUC  UUAUAACCgu  cc   a
g   u     g  CC          GG          --  gaa 

Annotation confidence High

Genome context

19: 26807507-26807593 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-195

Mature bta-miR-195-5p

• Accession: MIMAT0004335
• Description: Bos taurus bta-miR-195-5p mature miRNA
• Sequence: 15 - UAGCAGCACAGAAAUAUUGGCA - 36
• Evidence: experimental ; cloned [1]

Mature bta-miR-195-3p

• Accession: MIMAT0060972
• Description: Bos taurus bta-miR-195-3p mature miRNA
• Sequence: 53 - CCAAUAUUGGCUGUGCUGCUCCA - 75
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988