Stem-loop bta-let-7a-3

Accession

MI0005452

Description

Bos taurus bta-let-7a-3 precursor miRNA

Literature search

63 open access papers mention bta-let-7a-3
(289 sentences)

Sequence

2455060 reads, 11878 reads per million, 77 experiments

gggUGAGGUAGUAGGUUGUAUAGUUuggggcucugcccugcuaugggauaaCUAUACAAUCUACUGUCUUUCcu
(((.(((((((((((((((((((((((((((...)))))).........))))))))))))))))))))).)))

Structure

   U                     ---------      u 
ggg GAGGUAGUAGGUUGUAUAGUU         uggggc  
||| |||||||||||||||||||||         |||||| c
ucC UUCUGUCAUCUAACAUAUCaa         gucccg  
   U                     uaggguauc      u 

Annotation confidence High

Genome context

chr5: 117457806-117457879 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from bta-let-7a-3

Mature bta-let-7a-5p

• Accession: MIMAT0003844
• Description: Bos taurus bta-let-7a-5p mature miRNA
• Sequence: 4 - UGAGGUAGUAGGUUGUAUAGUU - 25
• Evidence: experimental ; cloned [1]

Mature bta-let-7a-3p

• Accession: MIMAT0004330
• Description: Bos taurus bta-let-7a-3p mature miRNA
• Sequence: 52 - CUAUACAAUCUACUGUCUUUC - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988