Stem-loop ath-MIR866

Accession

MI0005443

Description

Arabidopsis thaliana ath-MIR866 precursor miRNA

Literature search

1 open access papers mention ath-MIR866
(1 sentences)

Sequence

ucaucuauucuuacuuuUCAAGGAACGGAUUUUGUUAAcuaaaugauucacacccuugaagaaacacgaucucgugugaaucauuucguuaACAAAAUCCGUCUUUGAAGAguaaguauauuguga
((((.(((.(((((((((((((((.((((((((((((((.(((((((((((((..(((........)))....))))))))))))).))))))))))))))))))))))))))))).)))..))))

Structure

    -c   u               A              u             --cc   aag 
ucau  uau cuuacuuuUCAAGGA CGGAUUUUGUUAAc aaaugauucacac    uug   a
||||  ||| ||||||||||||||| |||||||||||||| |||||||||||||    |||    
agug  aua gaaugAGAAGUUUCU GCCUAAAACAauug uuuacuaagugug    agc   a
    uu   u               -              c             cucu   aca 

Annotation confidence Not enough data

Genome context

chr5: 16157823-16157948 [-]

Mature ath-miR866-5p

• Accession: MIMAT0004315
• Description: Arabidopsis thaliana ath-miR866-5p mature miRNA
• Sequence: 18 - UCAAGGAACGGAUUUUGUUAA - 38
• Evidence: experimental ; cloned [1]

Mature ath-miR866-3p

• Accession: MIMAT0004316
• Description: Arabidopsis thaliana ath-miR866-3p mature miRNA
• Sequence: 92 - ACAAAAUCCGUCUUUGAAGA - 111
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17299599
   High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes
   Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC
   PLoS One (2007) 2:e219