miRBase entry: cbr-mir-242

Stem-loop cbr-mir-242


Accession
MI0005429
Description
Caenorhabditis briggsae cbr-mir-242 precursor miRNA


Sequence

caauucuucuaagccaaaaaaagaauaUUGCGUAGGCCUUUGUUUCGAaagacccaaaaauuguucgcagcaaucuccuucgcaauauuuuuuggaagaggaaaug
...(((((((...(((((....((((((((((.(((...(((((.((((.((........)).)))).)))))...))).))))))))))))))).)))))))...

Structure
caa       aag     aaaa          U   CCU     U    a  ccc 
   uucuucu   ccaaa    gaauaUUGCG AGG   UUGUU CGAa ga   a
   |||||||   |||||    |||||||||| |||   ||||| |||| ||    
   aaggaga   gguuu    uuuauaacgc ucc   aacga gcuu uu   a
gua       --a     ----          u   ucu     c    g  aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrII: 15031448-15031553 [-]

Database links

Mature cbr-miR-242

Accession MIMAT0004296
Description Caenorhabditis briggsae cbr-miR-242 mature miRNA
Sequence 28 - UUGCGUAGGCCUUUGUUUCGA - 48
Evidence not_experimental

References

  1. PubMed ID: 17174894
    Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
    "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
    "Cell (2006) 127:1193-1207