Accession
MI0005386
Description
Arabidopsis thaliana
ath-MIR830 precursor miRNA
Literature search
1 open access papers mention ath-MIR830
(1 sentences)
(1 sentences)
Sequence
29767
reads,
158.0
reads per million, 177 experiments
cagagucucgcuagugucuuuacuaaacacaaaaucuguaaacgccucgaucuCCUCUUCUCCAAAUAGUUUAGGuuagcugacauauaauaauucaauagaccccaguuucuccagauaaccUAACUAUUUUGAGAAGAAGUGAACgaagagcgauuacaaguuaggagagugcuugaauuuugaagaacaucg
(((((((..((.(.(.((((.(((............(((((.(((((((.((.(.(((((((.((((((((.((((((.(((............((....))............))).)))))))))))))).))))))).).)).)).)).))).)))))))).)))).).)))..).))))))..........
(((((((..((.(.(.((((.(((............(((((.(((((((.((.(.(((((((.((((((((.((((((.(((............((....))............))).)))))))))))))).))))))).).)).)).)).))).)))))))).)))).).)))..).))))))..........
Structure
---------- - uc u g g u aaacacaaaauc a - - a u C C U g acauauaauaau a
cagagu c gc a u ucuu acu uguaa cgc cu cg uc C UCUUCUC AAAUAGUU AGGuua cug uc a
|||||| | || | | |||| ||| ||||| ||| || || || | ||||||| |||||||| |||||| ||| ||
guuuua g cg u a agga uga acauu gcg ga gC AG G AGAAGAG UUUAUCAA Uccaau gac ag u
gcuacaagaa a uu - g g u ------------ a a a A U A U - a cucuuugacccc a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr1: 4820355-4820549 [-]
Database links
Mature ath-miR830-5p
| Accession | MIMAT0004247 |
| Description | Arabidopsis thaliana ath-miR830-5p mature miRNA |
| Sequence | 54 - CCUCUUCUCCAAAUAGUUUAGG - 75 |
| Evidence |
experimental
cloned [2] |
Mature ath-miR830-3p
| Accession | MIMAT0004248 |
| Description | Arabidopsis thaliana ath-miR830-3p mature miRNA |
| Sequence | 124 - UAACUAUUUUGAGAAGAAGUGAAC - 147 |
| Evidence |
experimental
454 [1-2], cloned [2], Illumina [3] |
References
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