Stem-loop mdo-mir-191

Accession

MI0005341

Description

Monodelphis domestica mdo-mir-191 precursor miRNA

Sequence

30801 reads, 542 reads per million, 5 experiments

agcgggCAACGGAAUCCCAAAAGCAGCUguugucuccagagcauuccaGCUGCAAUUGGAUUUCGUUCCCugcu
((((((.((((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))).))))))

Structure

      C          C  AA       --u   cu 
agcggg AACGGAAUCC AA  GCAGCUg   ugu  c
|||||| |||||||||| ||  |||||||   |||  c
ucguCC UUGCUUUAGG UU  CGUCGac   acg  a
      C          -  AA       cuu   ag 

Annotation confidence High

Genome context

chr6: 201970817-201970890 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-191

Mature mdo-miR-191-5p

• Accession: MIMAT0004152
• Description: Monodelphis domestica mdo-miR-191-5p mature miRNA
• Sequence: 7 - CAACGGAAUCCCAAAAGCAGCU - 28
• Evidence: experimental ; Microarray [1], PCR [1], Illumina [2]

Mature mdo-miR-191-3p

• Accession: MIMAT0026696
• Description: Monodelphis domestica mdo-miR-191-3p mature miRNA
• Sequence: 49 - GCUGCAAUUGGAUUUCGUUCCC - 70
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45