Stem-loop mdo-mir-217

Accession

MI0005321

Description

Monodelphis domestica mdo-mir-217 precursor miRNA

Sequence

19 reads, 1.0 reads per million, 4 experiments

uugaugucguagaUACUGCAUCAGGAACUGAUUGGAUaauauucaggcaccaucaguuccuaaugcauugccuucagcaucu
..(((((.(.((.((.(((((.((((((((((.((..............)))))))))))).))))).)).)).).))))).

Structure

uu     c u  a  C     C          U  AUaaua 
  gaugu g ag UA UGCAU AGGAACUGAU GG      u
  ||||| | || || ||||| |||||||||| ||       
  cuacg c uc gu acgua uccuugacua cc      u
-u     a u  c  u     a          -  acggac 

Annotation confidence Not enough data

Genome context

ref|NC_077227.1|: 648075152-648075233 [+]

Mature mdo-miR-217-5p

• Accession: MIMAT0004132
• Description: Monodelphis domestica mdo-miR-217-5p mature miRNA
• Sequence: 14 - UACUGCAUCAGGAACUGAUUGGAU - 37
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72