Stem-loop mdo-mir-208a

Accession

MI0005318

Description

Monodelphis domestica mdo-mir-208a precursor miRNA

Sequence

180 reads, 12 reads per million, 1 experiments

uuccugugacaggugagcuuuugguccggguuauaccugaugcauguguAUAAGACGAGCAAAAAGCUCGUuggucg
.......(((...(((((((((.((.((..(((((((........).))))))..)).)).)))))))))...))).

Structure

uuccugu   agg         g  c  gg      - uga 
       gac   ugagcuuuu gu cg  uuauac c   u
       |||   ||||||||| || ||  |||||| |    
       cug   GCUCGAAAA CG GC  AAUAug g   g
------g   guU         A  A  AG      u uac 

Annotation confidence Not enough data

Genome context

chr1: 172794234-172794310 [-]

Mature mdo-miR-208a

• Accession: MIMAT0004129
• Description: Monodelphis domestica mdo-miR-208a mature miRNA
• Sequence: 50 - AUAAGACGAGCAAAAAGCUCGU - 71
• Evidence: not_experimental

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72