Stem-loop mdo-mir-124a-3

Accession

MI0005290

Description

Monodelphis domestica mdo-mir-124a-3 precursor miRNA

Sequence

141902 reads, 2650 reads per million, 4 experiments

cucugcGUGUUCACAGCGGACCUUGAUuuaaugucuauacaaUUAAGGCACGCGGUGAAUGCCAagag
((((..((((((((.(((..((((((((............))))))))..))).))))))))..))))

Structure

    gc        A   GA        uaaug 
cucu  GUGUUCAC GCG  CCUUGAUu     u
||||  |||||||| |||  ||||||||      
gaga  CGUAAGUG CGC  GGAAUUaa     c
    AC        G   AC        cauau 

Annotation confidence High

Genome context

chr1: 474834580-474834647 [-]

Mature mdo-miR-124a-3p

• Accession: MIMAT0004102
• Description: Monodelphis domestica mdo-miR-124a-3p mature miRNA
• Sequence: 43 - UUAAGGCACGCGGUGAAUGCCA - 64
• Evidence: experimental ; Microarray [1], PCR [1], Illumina [2]

Mature mdo-miR-124a-5p

• Accession: MIMAT0026660
• Description: Monodelphis domestica mdo-miR-124a-5p mature miRNA
• Sequence: 7 - GUGUUCACAGCGGACCUUGAU - 27
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45