Stem-loop mdo-mir-101-2

Accession

MI0005282

Description

Monodelphis domestica mdo-mir-101-2 precursor miRNA

Sequence

818164 reads, 12992 reads per million, 5 experiments

acuguccuuuuUCGGUUAUCAUGGUACCGAUGCUguauaugugaaaggUACAGUACUGUGAUAACUGAAGaaugguggu
((((.((((((((((((((((((((((.(.((((............))))).)))))))))))))))))))).))))))

Structure

    u  -                    C A    guaua 
acug cc uuuuUCGGUUAUCAUGGUAC G UGCU     u
|||| || |||||||||||||||||||| | ||||      
uggu gg aaGAAGUCAAUAGUGUCAUG C AUgg     g
    -  u                    A -    aaagu 

Annotation confidence Low

Genome context

chr6: 166669166-166669244 [+]

Mature mdo-miR-101-3p

• Accession: MIMAT0004098
• Description: Monodelphis domestica mdo-miR-101-3p mature miRNA
• Sequence: 49 - UACAGUACUGUGAUAACUGAAG - 70
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-101-2-5p

• Accession: MIMAT0026657
• Description: Monodelphis domestica mdo-miR-101-2-5p mature miRNA
• Sequence: 12 - UCGGUUAUCAUGGUACCGAUGCU - 34
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45