miRBase entry: ptc-MIR403c

Stem-loop ptc-MIR403c


Accession
MI0005115
Description
Populus trichocarpa ptc-MIR403c precursor miRNA

Literature search
1 open access papers mention ptc-MIR403c
(1 sentences)

Sequence

ggUUUGUGCGUGGAUCUGAGGCCaucacaaccguccacuacacgaccacccaauggcuUUAGAUUCACGCACAAACUCG
(((((((((((((((((((((((((.......(((........)))......)))))))))))))))))))))))))..

Structure
--                         cacaacc   cac 
  ggUUUGUGCGUGGAUCUGAGGCCau       guc   u
  |||||||||||||||||||||||||       |||    
  UCAAACACGCACUUAGAUUucggua       cag   a
GC                         -acccac   cac 


Annotation confidence Not enough data
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Genome context
CM000344.2: 6485433-6485511 [+]

Database links

Mature ptc-miR403c-3p

Accession MIMAT0003944
Description Populus trichocarpa ptc-miR403c-3p mature miRNA
Sequence 59 - UUAGAUUCACGCACAAACUCG - 79
Evidence experimental
miRNAseq [1]

Mature ptc-miR403c-5p

Accession MIMAT0022932
Description Populus trichocarpa ptc-miR403c-5p mature miRNA
Sequence 3 - UUUGUGCGUGGAUCUGAGGCC - 23
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22442676
    Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
    Puzey JR, Karger A, Axtell M, Kramer EM
    PLoS One (2012) 7:e33034