Stem-loop bta-mir-30a

Accession

MI0005054

Description

Bos taurus bta-mir-30a precursor miRNA

Literature search

167 open access papers mention bta-mir-30a
(962 sentences)

Sequence

78033913 reads, 43099.0 reads per million, 321 experiments

cUGUAAACAUCCUCGACUGGAAGCUgugaggcugcagaaaggCUUUCAGUCGGAUGUUUGCAGCugc
((((((((((((..(((((((((((...............)))))))))))))))))))))))....

Structure

----            UC           gugagg 
    cUGUAAACAUCC  GACUGGAAGCU      c
    ||||||||||||  |||||||||||      u
    GACGUUUGUAGG  CUGACUUUCgg      g
cguC            --           aaagac 

Annotation confidence High

Genome context

9: 10532171-10532237 [-]

Mature bta-miR-30a-5p

• Accession: MIMAT0003841
• Description: Bos taurus bta-miR-30a-5p mature miRNA
• Sequence: 2 - UGUAAACAUCCUCGACUGGAAGCU - 25
• Evidence: experimental ; cloned [1-2]

Mature bta-miR-30a-3p

• Accession: MIMAT0050796
• Description: Bos taurus bta-miR-30a-3p mature miRNA
• Sequence: 43 - CUUUCAGUCGGAUGUUUGCAGC - 64
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343