Stem-loop mmu-mir-615

Accession

MI0005004

Symbol

MGI: Mir615

Description

Mus musculus mmu-mir-615 precursor miRNA mir-615

Gene
family

RF00879; mir-615

Literature search

11 open access papers mention mmu-mir-615
(160 sentences)

Sequence

10381 reads, 71 reads per million, 59 experiments

ucgggaggggcgggagGGGGGUCCCCGGUGCUCGGAUCucgagggugcuuauuguucggUCCGAGCCUGGGUCUCCCUCUUccccccauccc
..((((((((.((((((((((..(((((.((((((((..((((.(.......).)))))))))))))))))..)))))))))))))).))))

Structure

uc    -    c          UC     U        Cu    g ug 
  ggga gggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
  |||| |||| ||||||||||  ||||| ||||||||  |||| |  u
  cccu cccc ccUUCUCCCU  GGGUC CGAGCCUg  gcuu u  u
--    a    -          CU     -        --    g ua 

Annotation confidence High

Genome context

chr15: 103014910-103015001 [+]

Mature mmu-miR-615-5p

• Accession: MIMAT0004837
• Description: Mus musculus mmu-miR-615-5p mature miRNA
• Sequence: 17 - GGGGGUCCCCGGUGCUCGGAUC - 38
• Evidence: experimental ; cloned [2], Illumina [3-4]

Mature mmu-miR-615-3p

• Accession: MIMAT0003783
• Description: Mus musculus mmu-miR-615-3p mature miRNA
• Sequence: 60 - UCCGAGCCUGGGUCUCCCUCUU - 81
• Evidence: experimental ; MPSS [1], cloned [2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771