Accession
MI0004957
Description
Xenopus tropicalis
xtr-mir-449a precursor miRNA
Sequence
cuguguuuagaaggaAGGCAGUGUAAUGUUAGCUGGUuggaaaauagcagacacUGGUUAACUUACACCUGCCCCCcuucuuuacau
..((((..((((((..((((((((((.((((((((((((........))...))))))))))))))).)))))..))))))..))))
..((((..((((((..((((((((((.((((((((((((........))...))))))))))))))).)))))..))))))..))))
Structure
cu uu aA - U --- gaa gugu agaagg GGCAG UGUAA GUUAGCUGGU ug a |||| |||||| ||||| ||||| |||||||||| || uaca ucuucC CCGUC ACAUU CAAUUGGUca ac a -- uu CC C - cag gau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Expression of the miR-449 family sequences is validated in X. laevis by SOLID sequencing [1].
Genome context
chr1: 178899869-178899955 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from xtr-mir-449a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xtr-miR-449a-5p
| Accession | MIMAT0003704 |
| Description | Xenopus tropicalis xtr-miR-449a-5p mature miRNA |
| Sequence | 16 - AGGCAGUGUAAUGUUAGCUGGU - 37 |
| Evidence | not_experimental |
Mature xtr-miR-449a-3p
| Accession | MIMAT0022716 |
| Description | Xenopus tropicalis xtr-miR-449a-3p mature miRNA |
| Sequence | 55 - UGGUUAACUUACACCUGCCCCC - 76 |
| Evidence | not_experimental |
References
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