Stem-loop xtr-mir-138

Accession

MI0004839

Description

Xenopus tropicalis xtr-mir-138 precursor miRNA

Sequence

7391 reads, 489.0 reads per million, 4 experiments

cggugcggagcagcAGCUGGUGUUGUGAAUCAGGCCGUGaccacucagaaaacgGCUACUUCACAACACCAGGGUUGcuucucac
..(((.((((((((..(((((((((((((...((((((.............))))))..))))))))))))).)))))))).)))

Structure

cg   c        AG             UCA      Gacca 
  gug ggagcagc  CUGGUGUUGUGAA   GGCCGU     c
  ||| ||||||||  |||||||||||||   ||||||     u
  cac cuucGUUG  GACCACAACACUU   UCGgca     c
--   u        -G             -CA      aaaga 

Annotation confidence High

Genome context

6: 50621533-50621617 [-]

Mature xtr-miR-138-5p

• Accession: MIMAT0003599
• Description: Xenopus tropicalis xtr-miR-138-5p mature miRNA
• Sequence: 15 - AGCUGGUGUUGUGAAUCAGGCCGUG - 39
• Evidence: not_experimental

Mature xtr-miR-138-3p

• Accession: MIMAT0052110
• Description: Xenopus tropicalis xtr-miR-138-3p mature miRNA
• Sequence: 55 - GCUACUUCACAACACCAGGGUUG - 77
• Evidence: not_experimental

References