miRBase entry: dre-mir-737

Stem-loop dre-mir-737


Accession
MI0004783
Description
Danio rerio dre-mir-737 precursor miRNA mir-737
Gene
family?
RF03956; mir-737

Literature search
1 open access papers mention dre-mir-737
(1 sentences)

Sequence

3195 reads, 261 reads per million, 11 experiments
ccacagcugcugugcuguuGUUUUUUUAGGUUUUGAUUUUugugaaaugucgaugagaaAAUCAAAACCUAAAGAAAAUAcugcgcagauagaugg
...((.(((((((((.((..(((((((((((((((((((((...............)))))))))))))))))))))..)).)))))).))).)).

Structure
cca  g   -      u  uG                     gugaaa 
   ca cug cugugc gu  UUUUUUUAGGUUUUGAUUUUu      u
   || ||| |||||| ||  |||||||||||||||||||||      g
   gu gau gacgcg cA  AAAGAAAUCCAAAACUAAaag      u
--g  a   a      u  UA                     aguagc 


Annotation confidence High
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Genome context
chr18: 45962897-45962992 [+]

Database links

Mature dre-miR-737-3p

Accession MIMAT0003768
Description Danio rerio dre-miR-737-3p mature miRNA
Sequence 60 - AAUCAAAACCUAAAGAAAAUA - 80
Evidence experimental
cloned [1], Northern [1]
Database links
Predicted targets

Mature dre-miR-737-5p

Accession MIMAT0032013
Description Danio rerio dre-miR-737-5p mature miRNA
Sequence 20 - GUUUUUUUAGGUUUUGAUUUU - 40
Evidence not_experimental
Database links

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569