Stem-loop dre-mir-735

Accession

MI0004781

Description

Danio rerio dre-mir-735 precursor miRNA

Literature search

3 open access papers mention dre-mir-735
(12 sentences)

Sequence

536890 reads, 1318.0 reads per million, 299 experiments

GGCUGGUCCGAAGGCGGUGGGUUAGUCUucucuccccuCUCCCACCGCUAAACUUGACCAGuc
((((((((....(((((((((..((...........))..)))))))))......))))))))

Structure

        --CGAA         UU  UCUu 
GGCUGGUC      GGCGGUGGG  AG    c
||||||||      |||||||||  ||    u
cuGACCAG      UCGCCACCC  uc    c
        UUCAAA         UC  cccu 

Annotation confidence Low

Genome context

chr24: 38177965-38178027 [-]

Mature dre-miR-735-5p

• Accession: MIMAT0032012
• Description: Danio rerio dre-miR-735-5p mature miRNA
• Sequence: 1 - GGCUGGUCCGAAGGCGGUGGGUUAGUCU - 28
• Evidence: not_experimental

Mature dre-miR-735-3p

• Accession: MIMAT0003766
• Description: Danio rerio dre-miR-735-3p mature miRNA
• Sequence: 39 - CUCCCACCGCUAAACUUGACCAG - 61
• Evidence: experimental ; cloned [1], in-situ [1], Northern [1]

References

1. PubMed ID: 16698962
   Cloning and expression of new microRNAs from zebrafish
   "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
   "Nucleic Acids Res (2006) 34:2558-2569