miRBase entry: dre-mir-734

Stem-loop dre-mir-734


Accession
MI0004780
Description
Danio rerio dre-mir-734 precursor miRNA mir-734
Gene
family?
RF03571; mir-734

Literature search
2 open access papers mention dre-mir-734
(2 sentences)

Sequence

83 reads, 12 reads per million, 10 experiments
ugauauugagagcugaaccauucugcagcauggcugccuguggauccucuggggaaagGUAAAUGCUGCAGAAUCGUACCGuucuugguauca
(((((((((((((.(.((.((((((((((((...(((((.....(((...)))...))))).)))))))))))).)).).)))))))))))))

Structure
             u a  c            ggc     gugga   u 
ugauauugagagc g ac auucugcagcau   ugccu     ucc  
||||||||||||| | || ||||||||||||   |||||     ||| c
acuaugguucuuG C UG UAAGACGUCGUA   AUGga     ggg  
             C A  C            --A     --aag   u 


Annotation confidence Not enough data
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Genome context
chr1: 34122880-34122972 [+]

Database links

Mature dre-miR-734

Accession MIMAT0003765
Description Danio rerio dre-miR-734 mature miRNA
Sequence 59 - GUAAAUGCUGCAGAAUCGUACCG - 81
Evidence experimental
cloned [1], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569