Accession
MI0004774
Description
Danio rerio
dre-mir-34c precursor miRNA mir-34
Gene
family?
family?
RF00456;
mir-34
Literature search
10 open access papers mention dre-mir-34c
(33 sentences)
(33 sentences)
Sequence
478
reads,
68
reads per million, 5 experiments
ugcuguguggucaccAGGCAGUGCAGUUAGUUGAUUACaauccauaaaguAAUCACUAACCUCACUACCAGGugaaggcuagua
(((((.((..(((((.((.((((..((((((.((((((..........))))))))))))..)))).)).)))))..)))))))
(((((.((..(((((.((.((((..((((((.((((((..........))))))))))))..)))).)).)))))..)))))))
Structure
u gg A C CA U aauc
ugcug gu ucacc GG AGUG GUUAGU GAUUAC c
||||| || ||||| || |||| |||||| ||||||
augau cg aguGG CC UCAC CAAUCA CUAAug a
- ga A A UC - aaau
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr5: 57922284-57922367 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dre-mir-34c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-34c-5p
| Accession | MIMAT0003759 |
| Description | Danio rerio dre-miR-34c-5p mature miRNA |
| Sequence | 16 - AGGCAGUGCAGUUAGUUGAUUAC - 38 |
| Evidence |
experimental
cloned [1], in-situ [1], Northern [1] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-34c-3p
| Accession | MIMAT0032011 |
| Description | Danio rerio dre-miR-34c-3p mature miRNA |
| Sequence | 51 - AAUCACUAACCUCACUACCAGG - 72 |
| Evidence | not_experimental |
| Database links |
|
References
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