miRBase entry: dre-mir-725

Stem-loop dre-mir-725


Accession
MI0004769
Description
Danio rerio dre-mir-725 precursor miRNA mir-725
Gene
family?
RF03884; mir-725

Literature search
4 open access papers mention dre-mir-725
(7 sentences)

Sequence

41311 reads, 2373 reads per million, 11 experiments
cugcagugcacauUGCUAGGAAUGGUGGCUGAGAUgaagagcaggauUUCAGUCAUUGUUUCUAGUAGUgcgcgcugcag
(((((((((.(((((((((((((((((((((((((..........))))))))))))))))))))))))).)))))))))

Structure
         a                         gaag 
cugcagugc cauUGCUAGGAAUGGUGGCUGAGAU    a
||||||||| |||||||||||||||||||||||||     
gacgucgcg gUGAUGAUCUUUGUUACUGACUUua    g
         c                         ggac 


Annotation confidence High
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Genome context
chr22: 24366193-24366272 [-]

Database links

Mature dre-miR-725-3p

Accession MIMAT0003753
Description Danio rerio dre-miR-725-3p mature miRNA
Sequence 48 - UUCAGUCAUUGUUUCUAGUAGU - 69
Evidence experimental
cloned [1], Northern [1]
Database links
Predicted targets

Mature dre-miR-725-5p

Accession MIMAT0032010
Description Danio rerio dre-miR-725-5p mature miRNA
Sequence 14 - UGCUAGGAAUGGUGGCUGAGAU - 35
Evidence not_experimental

References

  1. PubMed ID: 16698962
    Cloning and expression of new microRNAs from zebrafish
    "Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH"
    "Nucleic Acids Res (2006) 34:2558-2569