Stem-loop bta-mir-128a

Accession

MI0004755

Description

Bos taurus bta-mir-128a precursor miRNA mir-128

Gene
family

RF00649; mir-128

Literature search

11 open access papers mention bta-mir-128a
(22 sentences)

Sequence

6738421 reads, 2204.0 reads per million, 320 experiments

ugagcuguuggauuCGGGGCCGUAGCACUGUCUGAGAgguuuacauuucUCACAGUGAACCGGUCUCUUUUucagcugcuuc
.((((.((((((...(((((((...((((((..(((((((....)))))))))))))...)))))))...)))))).)))).

Structure

u    u      uuC       UAG      CU       u 
 gagc guugga   GGGGCCG   CACUGU  GAGAggu u
 |||| ||||||   |||||||   ||||||  |||||||  
 uucg cgacuU   CUCUGGC   GUGACA  CUcuuua a
c    u      UUU       CAA      --       c 

Annotation confidence High

Genome context

2: 61675775-61675856 [-]

Mature bta-miR-128a-5p

• Accession: MIMAT0062441
• Description: Bos taurus bta-miR-128a-5p mature miRNA
• Sequence: 15 - CGGGGCCGUAGCACUGUCUGAGA - 37
• Evidence: experimental ; Illumina [1]

Mature bta-miR-128a-3p

• Accession: MIMAT0003541
• Description: Bos taurus bta-miR-128a-3p mature miRNA
• Sequence: 50 - UCACAGUGAACCGGUCUCUUUU - 71
• Evidence: experimental ; Array [2], qRT-PCR [2], cloned [3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677