Stem-loop bta-mir-126

Accession

MI0004754

Description

Bos taurus bta-mir-126 precursor miRNA

Literature search

22 open access papers mention bta-mir-126
(159 sentences)

Sequence

494020 reads, 6019 reads per million, 64 experiments

ugacgggaCAUUAUUACUUUUGGUACGCGcugugacacuucaaacuCGUACCGUGAGUAAUAAUGCGcuguca
((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..))))))

Structure

      ga           U       CGcug   c 
ugacgg  CAUUAUUACUU UGGUACG     uga a
||||||  ||||||||||| |||||||     |||  
acuguc  GUAAUAAUGAG GCCAUGC     acu c
      GC           U       -ucaa   u 

Annotation confidence High

Genome context

chr11: 104385546-104385618 [+]

Mature bta-miR-126-5p

• Accession: MIMAT0004328
• Description: Bos taurus bta-miR-126-5p mature miRNA
• Sequence: 9 - CAUUAUUACUUUUGGUACGCG - 29
• Evidence: experimental ; cloned [2]

Mature bta-miR-126-3p

• Accession: MIMAT0003540
• Description: Bos taurus bta-miR-126-3p mature miRNA
• Sequence: 47 - CGUACCGUGAGUAAUAAUGCG - 67
• Evidence: experimental ; cloned [1-3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343