Stem-loop bta-mir-320a-2

Accession

MI0004748

Description

Bos taurus bta-mir-320a-2 precursor miRNA mir-320

Gene
family

RF00736; mir-320

Literature search

15 open access papers mention bta-mir-320a-2
(78 sentences)

Sequence

5534609 reads, 2379.0 reads per million, 321 experiments

aaaaacgaaaaagagGCCUUCUCUUCCCGGUUCUUCCcggagucgggAAAAGCUGGGUUGAGAGGGCGAaaaaggaagaggg
...............((((((((..(((((((.((((((....)))))).)))))))..))))))))...............

Structure

aaaaacgaaaaagag        UU       C      g 
               GCCUUCUC  CCCGGUU UUCCcg a
               ||||||||  ||||||| ||||||  
               CGGGAGAG  GGGUCGA AAgggc g
gggagaaggaaaaAG        UU       A      u 

Annotation confidence High

Genome context

20: 15245796-15245877 [+]

Mature bta-miR-320a-5p

• Accession: MIMAT0050780
• Description: Bos taurus bta-miR-320a-5p mature miRNA
• Sequence: 16 - GCCUUCUCUUCCCGGUUCUUCC - 37
• Evidence: experimental ; cloned [2]

Mature bta-miR-320a-3p

• Accession: MIMAT0003534
• Description: Bos taurus bta-miR-320a-3p mature miRNA
• Sequence: 48 - AAAAGCUGGGUUGAGAGGGCGA - 69
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343