miRBase entry: mmu-mir-680-1

Stem-loop mmu-mir-680-1


Accession
MI0004640
Symbol
MGI: Mir680-1
Description
Mus musculus mmu-mir-680-1 precursor miRNA

Literature search
7 open access papers mention mmu-mir-680-1
(11 sentences)

Sequence

4 reads, 134 reads per million, 4 experiments
agaaguGGGCAUCUGCUGACAUGGGGGccgaagucaggcgccaggaagcgggcacuuugcaucuuaucuccggaacaucgauccucuugacagccuugggugucaggcu
...(((.(((((((((((.((.(((((.(((.(((.((.(..((((.((((.....)))).))))..).)).).)).))).))))).)).))))...)))))))..)))

Structure
aga   -G       ---    A  U     c   a  - a  c cc    a    g 
   agu  GGCAUCU   GCUG CA GGGGG cga gu c gg g  agga gcgg c
   |||  |||||||   |||| || ||||| ||| || | || |  |||| |||| a
   ucg  cuguggg   cgac gu cuccu gcu ca g cc c  uucu cguu c
---   ga       uuc    a  u     a   a  a g  u ua    a    u 


Annotation confidence Not enough data
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Genome context
chr6: 129691535-129691643 [+]

Database links

Mature mmu-miR-680

Accession MIMAT0003457
Description Mus musculus mmu-miR-680 mature miRNA
Sequence 7 - GGGCAUCUGCUGACAUGGGGG - 27
Evidence experimental
MPSS [1]

References

  1. PubMed ID: 16582102
    The expression profile of microRNAs in mouse embryos
    "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
    "Nucleic Acids Res (2006) 34:1765-1771