miRBase entry: mmu-mir-760

Stem-loop mmu-mir-760


Accession
MI0004605
Symbol
MGI: Mir760
Description
Mus musculus mmu-mir-760 precursor miRNA mir-760
Gene
family?
RF00915; mir-760

Literature search
6 open access papers mention mmu-mir-760
(126 sentences)

Sequence

9543 reads, 126 reads per million, 86 experiments
cgggaggaugccucggugcggggcgcgucgccCCCCUCAGGCCACCAGAGCCCGGauaccucagaaauuCGGCUCUGGGUCUGUGGGGAgcgaaaugcaacccaaaccccguuuccccg
((((.(((((....(((..(((..(((((((.((((.((((((..(((((((.((((.........))))))))))))))))).)))).))))..)))..)))..))).))))).))))

Structure
    a     ccuc   gc   gc   --    c    U      AC       C    acc 
cggg ggaug    ggu  ggg  gcg  ucgc CCCC CAGGCC  CAGAGCC GGau   u
|||| |||||    |||  |||  |||  |||| |||| ||||||  ||||||| ||||   c
gccc uuugc    cca  ccc  cgu  agcg GGGG GUCUGG  GUCUCGG Cuua   a
    c     ---c   aa   aa   aa    A    U      --       -    aag 


Annotation confidence High
Do you think this miRNA is real?
Comments
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The 5' end of the miRNA may be offset with respect to previous annotations.

Genome context
chr3: 122293585-122293703 [-]

Database links

Mature mmu-miR-760-5p

Accession MIMAT0017245
Description Mus musculus mmu-miR-760-5p mature miRNA
Sequence 33 - CCCCUCAGGCCACCAGAGCCCGG - 55
Evidence experimental
Illumina [4]
Database links
Predicted targets

Mature mmu-miR-760-3p

Accession MIMAT0003898
Description Mus musculus mmu-miR-760-3p mature miRNA
Sequence 70 - CGGCUCUGGGUCUGUGGGGA - 89
Evidence experimental
cloned [1-2], RAKE [1], Illumina [3-4]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  3. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  4. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298