Stem-loop mmu-mir-374b

Accession

MI0004125

Symbol

MGI: Mir374b

Description

Mus musculus mmu-mir-374b precursor miRNA

Literature search

18 open access papers mention mmu-mir-374b
(64 sentences)

Sequence

64980 reads, 255 reads per million, 106 experiments

gaagaaauccuacucggguggAUAUAAUACAACCUGCUAAGUGuucuagcacuuagcaGGUUGUAUUAUCAUUGUCCGAGguuauggcucucguc
((.((...((..((((((..((((((((((((((((((((((((....))))))))))))))))))))).))).)))))).....)).))))...

Structure

---  a  aau  ---ua      ug   -                     u 
   ga ga   cc     cucggg  gAU AUAAUACAACCUGCUAAGUGu c
   || ||   ||     ||||||  ||| |||||||||||||||||||||  
   cu cu   gg     GAGCCU  UUA UAUUAUGUUGGacgauucacg u
cug  -  --c  uauug      -G   C                     a 

Annotation confidence High

Genome context

chrX: 103573060-103573154 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmu-mir-374b

Mature mmu-miR-374b-5p

• Accession: MIMAT0003727
• Description: Mus musculus mmu-miR-374b-5p mature miRNA
• Sequence: 22 - AUAUAAUACAACCUGCUAAGUG - 43
• Evidence: experimental ; cloned [2], Illumina [3-4]

Mature mmu-miR-374b-3p

• Accession: MIMAT0003728
• Description: Mus musculus mmu-miR-374b-3p mature miRNA
• Sequence: 59 - GGUUGUAUUAUCAUUGUCCGAG - 80
• Evidence: experimental ; MPSS [1], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771