miRBase entry: mmu-mir-675

Stem-loop mmu-mir-675


Accession
MI0004123
Symbol
MGI: Mir675
Description
Mus musculus mmu-mir-675 precursor miRNA mir-675
Gene
family?
RF00897; mir-675

Literature search
38 open access papers mention mmu-mir-675
(296 sentences)

Sequence

1592 reads, 120 reads per million, 34 experiments
ugcggcccagggacUGGUGCGGAAAGGGCCCACAGUggacuugguacaCUGUAUGCCCUAACCGCUCAGUcccugggucuggca
(((((((((((((((((.((((..(((((..((((((.........))))))..)))))..))))))))))))))))))..)))

Structure
   --              U    AA     CC      gac 
ugc  ggcccagggacUGG GCGG  AGGGC  ACAGUg   u
|||  |||||||||||||| ||||  |||||  ||||||   u
acg  cugggucccUGACU CGCC  UCCCG  UGUCac   g
   gu              -    AA     UA      aug 


Annotation confidence High
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Genome context
chr7: 142577064-142577147 [-]

Database links

Mature mmu-miR-675-5p

Accession MIMAT0003725
Description Mus musculus mmu-miR-675-5p mature miRNA
Sequence 15 - UGGUGCGGAAAGGGCCCACAGU - 36
Evidence experimental
MPSS [1], Illumina [2-3]
Database links
Predicted targets

Mature mmu-miR-675-3p

Accession MIMAT0003726
Description Mus musculus mmu-miR-675-3p mature miRNA
Sequence 49 - CUGUAUGCCCUAACCGCUCAGU - 70
Evidence experimental
MPSS [1], Illumina [2-3]
Database links
Predicted targets

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  2. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  3. PubMed ID: 16582102
    The expression profile of microRNAs in mouse embryos
    "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
    "Nucleic Acids Res (2006) 34:1765-1771